chr1 : 166,158,717 – 166,159,201
484 bp 12 TFs 3 linked genes
This 484 bp open chromatin element is linked to ENSG00000230898, ENSG00000229588, and FAM78B and is bound by 12 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000230898 5.9 kb Proximal Proximity
ENSG00000229588 6.6 kb Proximal Proximity
FAM78B 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:166,153,717 – 166,164,201
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 249 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 384 bp overlap
ChIP DE DE-FOXA2-2 343 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 149 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 290 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 303 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 469 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
ChIP foregut GSE117136.GATA4.foregut 472 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 434 bp overlap
ChIP DE DE-GATA6-2 484 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 484 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 484 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 475 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 484 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 462 bp overlap
ChIP foregut GSE117136.GATA6.foregut 407 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 403 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 305 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 400 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 433 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 289 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 316 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 209 bp overlap