chr8 : 124,223,096 – 124,223,793
697 bp 60 TFs 2 linked genes
This 697 bp open chromatin element is linked to TMEM65 and RNF139 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TMEM65 149.3 kb Distal Multiome
RNF139 251.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:124,218,096 – 124,228,793
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 165 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 351 bp overlap
ChIP K562 ENCFF673OEZ 126 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 139 bp overlap
CEBPB 4 datasets
ChIP A549 ENCFF235AIY 257 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 149 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 158 bp overlap
ChIP K562 ENCFF584CTB 525 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 111 bp overlap
CEBPG 4 datasets
ChIP K-562 ENCSR490LWA.CEBPG.K-562 235 bp overlap
ChIP K-562 ENCSR620VIC.CEBPG.K-562 309 bp overlap
ChIP K562 ENCFF783ADE 561 bp overlap
ChIP K562 ENCFF956TPS 511 bp overlap
CTCF 3 datasets
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 235 bp overlap
ChIP endodermal cell ENCFF471YCZ 201 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 311 bp overlap
ChIP BLaER1 ENCFF858JKM 457 bp overlap
ChIP BLaER1 ENCFF896HSY 299 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 466 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 110 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 57 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 65 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 131 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 70 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 106 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 87 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 76 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 159 bp overlap
ESRRA 11 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 580 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 456 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 422 bp overlap
Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 342 bp overlap
ChIP K562 ENCFF968PEP 193 bp overlap
ChIP K562 ENCFF968PEP 337 bp overlap
ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 221 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 450 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 499 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 373 bp overlap
ESRRB 1 dataset
Motif DE_72h DE_72h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 527 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 550 bp overlap
ChIP DE DE-FOXA2-2 638 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 62 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 123 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 151 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 330 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 231 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 126 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 60 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 697 bp overlap
ChIP DE DE-GATA4-2 697 bp overlap
ChIP G296S GSE85628.GATA4.G296S 100 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 100 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 545 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 140 bp overlap
ChIP foregut GSE117136.GATA4.foregut 469 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 613 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 617 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 697 bp overlap
ChIP DE DE-GATA6-2 697 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 697 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 697 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 697 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 697 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 697 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 697 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 697 bp overlap
ChIP foregut GSE117136.GATA6.foregut 564 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 367 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 609 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 600 bp overlap
ChIP K562 ENCFF055GAZ 173 bp overlap
ChIP K562 ENCFF317JJX 171 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 61 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 284 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 92 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 108 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 107 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 260 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
MAF 1 dataset
Motif DE_72h DE_72h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_72h DE_72h-MAFA_MA1521.2 13 bp overlap
Mafg 1 dataset
Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap
NR5A1 1 dataset
Motif DE_72h DE_72h-NR5A1_MA1540.3 12 bp overlap
Nr5A2 1 dataset
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 457 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 170 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 106 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 58 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 697 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 697 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 663 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 621 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 697 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 697 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 697 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 593 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 175 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 322 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 572 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 593 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 648 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 164 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 50 bp overlap
SPIB 1 dataset
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SREBF1 1 dataset
ChIP MCF-7 ENCFF254QOR 77 bp overlap
Spi1 1 dataset
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 237 bp overlap
TAL1 10 datasets
ChIP CD34 GSE52924.TAL1.CD34 103 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 274 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 213 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 151 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 174 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 183 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 210 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 226 bp overlap
ChIP K562 ENCFF661CCK 260 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 134 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 193 bp overlap
TCF7L2 2 datasets
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 105 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 331 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 646 bp overlap
ZNF134 1 dataset
ChIP HEK293 GSE76494.ZNF134.HEK293 150 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 197 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap