chr8 : 132,625,357 – 132,625,870
513 bp 24 TFs 3 linked genes
This 513 bp open chromatin element is linked to DNAAF11, KCNQ3, and PHF20L1 and is bound by 24 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DNAAF11 294 bp At TSS Multiome
KCNQ3 144.6 kb Distal Multiome
PHF20L1 149.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:132,620,357 – 132,630,870
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
CDK2 1 dataset
ChIP T-47D_PROGESTIN_30M GSE53855.CDK2.T-47D_PROGESTIN_30M 117 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRC.CREB1.A-549 160 bp overlap
EBF1 1 dataset
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 169 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 303 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 278 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 388 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 332 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 158 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 274 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 348 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 513 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 513 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 308 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 513 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 482 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 513 bp overlap
ChIP hESC GSE20650.NANOG.hESC 292 bp overlap
ChIP hESC GSE18292.NANOG.hESC 173 bp overlap
POU5F1 8 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 495 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 344 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 472 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 328 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 513 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 422 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 178 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 336 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 386 bp overlap
TBP 2 datasets
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 230 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 355 bp overlap
Thap11 1 dataset
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 177 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF382 1 dataset
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
Znf423 1 dataset
Motif ES_0h ES_0h-Znf423_MA0116.1 15 bp overlap