chr8 : 141,016,712 – 141,017,668
956 bp 80 TFs 3 linked genes
This 956 bp open chromatin element is linked to PTK2, DENND3, and SLC45A4 and is bound by 80 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PTK2 15.8 kb Distal Multiome
DENND3 111.5 kb Distal Multiome
SLC45A4 291.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:141,011,712 – 141,022,668
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 188 bp overlap
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 224 bp overlap
ARID1A 5 datasets
ChIP 12Z GSE129781.ARID1A.12Z 103 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 933 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 226 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 289 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 97 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 219 bp overlap
ARNTL 2 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 68 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 68 bp overlap
ATOH8 1 dataset
ChIP A549 ENCFF772HNB 281 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 158 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 90 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 119 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 119 bp overlap
BRD4 14 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 113 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 204 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 472 bp overlap
ChIP MDA-MB-231_JQ1-pos_L GSE136151.BRD4.MDA-MB-231_JQ1-pos_L 132 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 91 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 118 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 248 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 247 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 367 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 169 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 438 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 95 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 348 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 100 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 99 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 369 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 531 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 251 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 135 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 485 bp overlap
ChIP BLaER1 ENCFF274GAT 402 bp overlap
ChIP BLaER1 ENCFF335XTP 91 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 192 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 265 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 256 bp overlap
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
EP300 1 dataset
ChIP A549 ENCFF960ZEI 94 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 266 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 132 bp overlap
ChIP MM.1S ENCFF138BXR 457 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 192 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 137 bp overlap
ChIP MCF-7 ENCFF282FWZ 171 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 77 bp overlap
FOSL1 2 datasets
ChIP 143B GSE74230.FOSL1.143B 52 bp overlap
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 133 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 106 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 104 bp overlap
ChIP A549 ENCFF651PDH 88 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 61 bp overlap
ChIP MDA-MB-231 GSE132098.FOSL2.MDA-MB-231 74 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 311 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 252 bp overlap
GATA6 5 datasets
ChIP DE_D2 S55-DE-d2-GATA6-exp2 290 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 115 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 577 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 296 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 249 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 166 bp overlap
HOXB5 1 dataset
ChIP A549 ENCFF891VDO 113 bp overlap
JUN 11 datasets
ChIP 786-O GSE86092.JUN.786-O 268 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 956 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 300 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 956 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 916 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 506 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 140 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 956 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 590 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 360 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 508 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 101 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCFF642OHL 54 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 97 bp overlap
MAX 2 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 62 bp overlap
ChIP MDA-MB-231 GSE127192.MAX.MDA-MB-231 160 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 582 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 550 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 273 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 342 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 286 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 66 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 162 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 856 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 382 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 167 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 380 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 380 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 193 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 149 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 191 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 184 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 117 bp overlap
SIN3A 1 dataset
ChIP A549 ENCFF752ATT 220 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 931 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 857 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 597 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 285 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 509 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 509 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 283 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 84 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 115 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 114 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 123 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 870 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 333 bp overlap
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 394 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 315 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 271 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 140 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 162 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 263 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 223 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 369 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 140 bp overlap
TEAD1 4 datasets
ChIP H69 GSE62274.TEAD1.H69 211 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 73 bp overlap
ChIP HepG2 ENCFF661PNM 71 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 125 bp overlap
TEAD4 7 datasets
ChIP HCT-116_F4 GSE152144.TEAD4.HCT-116_F4 136 bp overlap
ChIP HepG2 ENCFF006QNB 117 bp overlap
ChIP Ishikawa ENCFF772OTG 51 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 169 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 67 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 74 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 66 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 198 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 141 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 164 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 226 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 98 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 67 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 52 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 492 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 185 bp overlap
ZFHX2 2 datasets
ChIP HEK293 ENCFF167TUA 214 bp overlap
ChIP HEK293 ENCFF167TUA 303 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 199 bp overlap
ChIP K562 ENCFF255RZG 297 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 319 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 206 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 229 bp overlap
ZNF436 1 dataset
ChIP HEK293 GSE76494.ZNF436.HEK293 163 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 283 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 84 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 428 bp overlap