chr9 : 32,950,445 – 32,951,255
810 bp 12 TFs 5 linked genes
This 810 bp open chromatin element is linked to 5 target genes and is bound by 12 transcription factors.
Linked Genes
5 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
APTX 50.8 kb Distal Multiome
DNAJA1 74.4 kb Distal Multiome
SMU1 125.8 kb Distal Multiome
B4GALT1 216.5 kb Distal Multiome
NDUFB6 377.7 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:32,945,445 – 32,956,255
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 306 bp overlap
ChIP BLaER1 ENCFF262VBH 330 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ChIP BLaER1 ENCFF460KDD 287 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 425 bp overlap
ChIP DE DE-GATA4-2 554 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 504 bp overlap
ChIP DE DE-GATA6-2 609 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 325 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 379 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 515 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 432 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 403 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 400 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 515 bp overlap
ZNF143 1 dataset
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZNF76 1 dataset
Motif DE_60h DE_60h-ZNF76_MA1716.2 17 bp overlap