chr9 : 34,451,289 – 34,451,492
203 bp 49 TFs 2 linked genes
This 203 bp open chromatin element is linked to FAM219A and DNAI1 and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FAM219A 7.1 kb Proximal Proximity
DNAI1 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:34,446,289 – 34,456,492
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AHR 2 datasets
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 104 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 132 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 97 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 203 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 181 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 97 bp overlap
ChIP BLaER1 ENCFF460KDD 191 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 71 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 144 bp overlap
ERG 7 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 99 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 125 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 93 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 119 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 86 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 78 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 91 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 129 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 75 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 99 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 120 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 99 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 54 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 97 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 154 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 203 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 203 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 110 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 101 bp overlap
GRHL1 1 dataset
ChIP MCF-7 GSE140185.GRHL1.MCF-7 172 bp overlap
GRHL2 7 datasets
ChIP HBE GSE46194.GRHL2.HBE 128 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 171 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 162 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 203 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 203 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 186 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 175 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 168 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 198 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 203 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 148 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 135 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 203 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 102 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 104 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 185 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 203 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 203 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 191 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 193 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 104 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 118 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 124 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 111 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 144 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 52 bp overlap
ChIP K562 ENCFF506JCB 135 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 182 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 203 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 203 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 195 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 203 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 68 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 123 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 149 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 203 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 145 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 86 bp overlap
STAT3 4 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 142 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 201 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 129 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 192 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 176 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 203 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 203 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 135 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 139 bp overlap