chr9 : 91,721,275 – 91,721,895
620 bp 91 TFs 2 linked genes
This 620 bp open chromatin element is linked to ROR2 and NFIL3 and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ROR2 228.8 kb Distal Multiome
NFIL3 297.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:91,716,275 – 91,726,895
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 192 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 349 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 57 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 122 bp overlap
CDX1 1 dataset
Motif DE_72h DE_72h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_72h DE_72h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_72h DE_72h-CDX4_MA1473.2 9 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 106 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 311 bp overlap
ChIP K562 ENCFF403WPG 179 bp overlap
CTCF 1 dataset
ChIP OCI-LY7 ENCFF086AXQ 74 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 70 bp overlap
EBF1 1 dataset
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
ESR1 18 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 192 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 171 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 248 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 122 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 112 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 190 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 245 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 232 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 134 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 173 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 191 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 182 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 208 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 186 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 129 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 176 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 83 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 172 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 97 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 149 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 240 bp overlap
ChIP K562 ENCFF968PEP 168 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 172 bp overlap
Ebf4 1 dataset
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FOS 3 datasets
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 88 bp overlap
ChIP myometrium_PT1063 GSE128230.FOS.myometrium_PT1063 70 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 125 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 300 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 133 bp overlap
ChIP DE DE-FOXA2-1 435 bp overlap
ChIP DE DE-FOXA2-2 523 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 325 bp overlap
FOXD2 1 dataset
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 224 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 283 bp overlap
GATA2 3 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP ESF GSE108408.GATA2.ESF 226 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 242 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 448 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 345 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 360 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 314 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 343 bp overlap
ChIP DE DE-GATA6-2 414 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 279 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 322 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 341 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 331 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap
ChIP foregut GSE117136.GATA6.foregut 354 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 338 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 345 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HOXA10 1 dataset
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
HOXC11 1 dataset
Motif DE_72h DE_72h-HOXC11_MA0651.3 11 bp overlap
HOXD10 1 dataset
Motif DE_72h DE_72h-HOXD10_MA1506.2 10 bp overlap
HOXD9 1 dataset
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF616FJX 59 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 323 bp overlap
ChIP K562 ENCFF348IBL 227 bp overlap
ChIP K562 ENCFF771OHZ 351 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
ChIP myometrium_PT886 GSE128230.JUN.myometrium_PT886 74 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 159 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
MED12 14 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 104 bp overlap
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 89 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 104 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 125 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 96 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 111 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 108 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 82 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 96 bp overlap
ChIP myometrium_PT848 GSE128230.MED12.myometrium_PT848 100 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 332 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 113 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 84 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 93 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 113 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 368 bp overlap
NFYB 3 datasets
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 168 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 209 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 130 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 158 bp overlap
PATZ1 1 dataset
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
PGR 4 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 332 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 301 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 155 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 218 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 387 bp overlap
PRDM9 2 datasets
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 127 bp overlap
SMAD2 1 dataset
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 198 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 152 bp overlap
SOX10 2 datasets
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 311 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 494 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SOX4 2 datasets
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 320 bp overlap
ChIP K562 ENCFF059YCJ 338 bp overlap
SP2 1 dataset
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPI1 8 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 132 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 219 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 82 bp overlap
ChIP HL-60 ENCFF645GBT 147 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 144 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 162 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 192 bp overlap
ChIP K562 ENCFF410ORC 108 bp overlap
SPIB 1 dataset
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 426 bp overlap
Sox11 2 datasets
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox6 2 datasets
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 284 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 166 bp overlap
ChIP K562 ENCFF620GMX 105 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 148 bp overlap
ChIP K562 ENCFF319QZT 296 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 70 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 106 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD4 2 datasets
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 171 bp overlap
THAP1 1 dataset
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 129 bp overlap
ZBTB18 1 dataset
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 258 bp overlap
ZNF263 1 dataset
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF410 1 dataset
Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap