chr9 : 94,265,485 – 94,266,084
599 bp 31 TFs 2 linked genes
This 599 bp open chromatin element is linked to ZNF169 and LINC02603 and is bound by 31 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF169 6.2 kb Proximal Proximity
LINC02603 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:94,260,485 – 94,271,084
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 261 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF521IZR 349 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 411 bp overlap
CDX2 4 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 163 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 149 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 146 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 215 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 124 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF775HUO 577 bp overlap
ChIP K562 ENCFF775HUO 391 bp overlap
FOXA1 2 datasets
ChIP LS180 GSE140533.FOXA1.LS180 64 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 155 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 254 bp overlap
ChIP DE DE-FOXA2-1 599 bp overlap
ChIP DE DE-FOXA2-2 599 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 541 bp overlap
GATA1 1 dataset
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 2 datasets
ChIP HepG2 ENCFF905PYM 371 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 599 bp overlap
ChIP DE DE-GATA4-2 599 bp overlap
ChIP foregut GSE117136.GATA4.foregut 317 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 519 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 316 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 226 bp overlap
ChIP DE DE-GATA6-1 599 bp overlap
ChIP DE DE-GATA6-2 599 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 582 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 582 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 599 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 561 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 546 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 484 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 503 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 354 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 173 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 341 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap
ChIP foregut GSE117136.GATA6.foregut 366 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 353 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 451 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 491 bp overlap
NCOA1 1 dataset
ChIP LS180 GSE39277.NCOA1.LS180 99 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 108 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 355 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 394 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 296 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 544 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 133 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 247 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 209 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 315 bp overlap
TAL1 1 dataset
ChIP K562 ENCFF620GMX 385 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 391 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 477 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 267 bp overlap
ZNF121 1 dataset
ChIP HepG2 ENCFF343YSL 289 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 302 bp overlap