chr9 : 98,942,529 – 98,942,988
459 bp 33 TFs 2 linked genes
This 459 bp open chromatin element is linked to ENSG00000270412 and COL15A1 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000270412 786 bp At TSS Proximity
COL15A1 917 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:98,937,529 – 98,947,988
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 459 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 69 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 93 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 229 bp overlap
ChIP K562 ENCFF673OEZ 311 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 300 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 84 bp overlap
DIDO1 1 dataset
ChIP K-562 ENCSR167JBG.DIDO1.K-562 310 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 137 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 68 bp overlap
EZH2 2 datasets
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 352 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 154 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 65 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 128 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 222 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 213 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 351 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 203 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 459 bp overlap
ChIP DE DE-GATA4-2 459 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 459 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 196 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 314 bp overlap
ChIP K562 ENCFF539BYI 347 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 299 bp overlap
ChIP K562 ENCFF968WBH 429 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 278 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 230 bp overlap
ChIP K562 ENCFF744ALD 302 bp overlap
ChIP K562 ENCFF744ALD 349 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 67 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 105 bp overlap
KDM1A 6 datasets
ChIP K-562 GSE117944.KDM1A.K-562 275 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 187 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 235 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 258 bp overlap
ChIP K562 ENCFF128TYE 357 bp overlap
ChIP K562 ENCFF934ZRG 346 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 115 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 77 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 158 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 216 bp overlap
ChIP K562 ENCFF957ORK 292 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 243 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 369 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 336 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 165 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 114 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 144 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 167 bp overlap
ChIP K562 ENCFF254RJL 319 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 283 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 243 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 184 bp overlap
ChIP K562 ENCFF361LXT 299 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 245 bp overlap