chr9 : 104,934,663 – 104,934,869
206 bp 13 TFs 2 linked genes
This 206 bp open chromatin element is linked to ABCA1 and ENSG00000226334 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ABCA1 6.5 kb Proximal Proximity
ENSG00000226334 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:104,929,663 – 104,939,869
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 206 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 112 bp overlap
ESR1 7 datasets
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 54 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 51 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 113 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 67 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 73 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 67 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 91 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 206 bp overlap
ChIP DE DE-FOXA2-2 206 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 171 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 164 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 206 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 206 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 206 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 186 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 206 bp overlap
ChIP foregut GSE117136.GATA6.foregut 206 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 73 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 206 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 206 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 206 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 188 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 104 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 105 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 206 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 149 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 155 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 74 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 55 bp overlap