chr1 : 181,035,921 – 181,036,673
752 bp 125 TFs 3 linked genes
This 752 bp open chromatin element is linked to MR1, STX6, and IER5 and is bound by 125 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MR1 2.5 kb Proximal Proximity
STX6 13.4 kb Distal Multiome
IER5 52.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:181,030,921 – 181,041,673
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 244 bp overlap
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 169 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 438 bp overlap
ChIP K562 ENCFF938UXQ 244 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 586 bp overlap
ATF6 1 dataset
ChIP K562 ENCFF032AOW 222 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 351 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 286 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 219 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 178 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 228 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 295 bp overlap
ChIP K562 ENCFF673OEZ 157 bp overlap
CEBPA 3 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 269 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 99 bp overlap
CEBPB 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 305 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 210 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 219 bp overlap
CREBBP 1 dataset
ChIP monocyte_IFNg-LPS GSE131294.CREBBP.monocyte_IFNg-LPS 193 bp overlap
CTBP1 3 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 685 bp overlap
ChIP K562 ENCFF403WPG 374 bp overlap
ChIP K562 ENCFF403WPG 448 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF057AIX 345 bp overlap
CXXC5 2 datasets
ChIP K562 ENCFF497CZN 561 bp overlap
ChIP K562 ENCFF497CZN 502 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 222 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 243 bp overlap
ChIP K562 ENCFF739JDE 497 bp overlap
ChIP K562 ENCFF775HUO 274 bp overlap
E4F1 2 datasets
ChIP K562 ENCFF622HMZ 452 bp overlap
ChIP K562 ENCFF622HMZ 601 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 395 bp overlap
ELF1 3 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 198 bp overlap
ChIP K562 ENCFF886KFV 401 bp overlap
ChIP K562 ENCFF886KFV 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 291 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 303 bp overlap
ChIP K562 ENCFF226VMS 317 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 185 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 752 bp overlap
ChIP K562 ENCFF968PEP 444 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 666 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 676 bp overlap
ChIP DE DE-FOXA2-2 547 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 208 bp overlap
FOXA3 2 datasets
ChIP K562 ENCFF781VSC 341 bp overlap
ChIP K562 ENCFF781VSC 333 bp overlap
GATA1 5 datasets
ChIP K-562 GSE107726.GATA1.K-562 387 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 197 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 200 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 173 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 5 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 230 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 749 bp overlap
ChIP K562 ENCFF830LLA 577 bp overlap
ChIP K562 ENCFF830LLA 533 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 245 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 246 bp overlap
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
ChIP foregut GSE117136.GATA4.foregut 515 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 476 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 497 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 509 bp overlap
ChIP DE DE-GATA6-2 598 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 490 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 439 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 397 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 538 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 447 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 471 bp overlap
ChIP foregut GSE117136.GATA6.foregut 530 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 421 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 284 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 475 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 139 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 442 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 115 bp overlap
ChIP K562 ENCFF968WBH 521 bp overlap
ChIP K562 ENCFF968WBH 459 bp overlap
HDAC2 7 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 115 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 503 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 257 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 211 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
ChIP K562 ENCFF744ALD 421 bp overlap
ChIP K562 ENCFF744ALD 421 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 406 bp overlap
HLTF 2 datasets
ChIP K562 ENCFF783OCM 352 bp overlap
ChIP K562 ENCFF783OCM 391 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 238 bp overlap
ChIP K562 ENCFF055GAZ 526 bp overlap
ChIP K562 ENCFF055GAZ 301 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 554 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 568 bp overlap
ChIP K562 ENCFF348IBL 330 bp overlap
ChIP K562 ENCFF771OHZ 497 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 167 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 187 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 445 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 252 bp overlap
ChIP K562 ENCFF128TYE 461 bp overlap
KLF6 1 dataset
ChIP K-562 ENCSR297CGF.KLF6.K-562 250 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 172 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 367 bp overlap
ChIP K562 ENCFF320EQC 252 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 328 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 187 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 311 bp overlap
MEF2D 1 dataset
ChIP K562 ENCFF392LDT 421 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 437 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 308 bp overlap
ChIP K562 ENCFF731XJJ 425 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 337 bp overlap
ChIP K562 ENCFF230ZKA 445 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 217 bp overlap
ChIP K562 ENCFF441KCP 417 bp overlap
MTA3 4 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 425 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 357 bp overlap
ChIP K562 ENCFF289UFB 537 bp overlap
ChIP K562 ENCFF289UFB 411 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 294 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 531 bp overlap
NCOA2 3 datasets
ChIP HepG2 ENCFF853BJJ 451 bp overlap
ChIP HepG2 ENCFF853BJJ 382 bp overlap
ChIP MCF-7 ERP000901.NCOA2.MCF-7 138 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 445 bp overlap
NCOR2 1 dataset
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 146 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 243 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 285 bp overlap
ChIP K562 ENCFF568JLK 411 bp overlap
NR2C2 1 dataset
ChIP K-562 ENCSR750LYM.NR2C2.K-562 464 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 503 bp overlap
ChIP K562 ENCFF221HJH 497 bp overlap
NR2F6 3 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 179 bp overlap
ChIP K562 ENCFF674RQA 457 bp overlap
ChIP K562 ENCFF674RQA 400 bp overlap
NR4A1 1 dataset
ChIP K562 ENCFF998LHF 465 bp overlap
NR5A1 1 dataset
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 131 bp overlap
PATZ1 1 dataset
ChIP K562 ENCFF610CJH 341 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 574 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 223 bp overlap
ChIP K562 ENCFF286KMN 401 bp overlap
PHB 1 dataset
ChIP K562 ENCFF225VHG 337 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 443 bp overlap
ChIP K562 ENCFF236IUS 282 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 416 bp overlap
RAD51 1 dataset
ChIP K562 ENCFF133ELP 405 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RELA 4 datasets
ChIP K-562 ENCSR772EEN.RELA.K-562 450 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 164 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 245 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 162 bp overlap
REST 1 dataset
ChIP K562 ENCFF685YZN 381 bp overlap
RFX5 2 datasets
ChIP HeLa-S3 ENCFF703XPB 325 bp overlap
ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 125 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 611 bp overlap
RREB1 1 dataset
ChIP K-562 ENCSR250WFW.RREB1.K-562 418 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 419 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 541 bp overlap
ChIP K562 ENCFF628RBP 503 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 545 bp overlap
ChIP K562 ENCFF506JCB 517 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 351 bp overlap
ChIP K562 ENCFF690CFF 517 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 150 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 381 bp overlap
ChIP K562 ENCFF059YCJ 437 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 153 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 170 bp overlap
STAT1 3 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 188 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 343 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 178 bp overlap
STAT3 3 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 398 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 352 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 287 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 241 bp overlap
TAL1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 190 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 199 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 161 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 536 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF465AQA 297 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 385 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 216 bp overlap
USF1 3 datasets
ChIP HepG2 ENCFF201JKA 337 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 143 bp overlap
ChIP K562 ENCFF633EZB 265 bp overlap
USF2 3 datasets
ChIP Hep-G2 GSE97661.USF2.Hep-G2 141 bp overlap
ChIP K562 ENCFF306QPU 537 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 147 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 158 bp overlap
ZBTB9 2 datasets
ChIP K562 ENCFF233EFX 397 bp overlap
ChIP K562 ENCFF233EFX 391 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 313 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 325 bp overlap
ChIP K562 ENCFF795CMH 477 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 184 bp overlap
ZKSCAN5 1 dataset
ChIP HepG2 ENCFF579HCQ 258 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 257 bp overlap
ChIP K562 ENCFF361LXT 193 bp overlap
ZNF146 2 datasets
ChIP K562 ENCFF274MAU 158 bp overlap
ChIP K562 ENCFF477SLH 177 bp overlap
ZNF239 3 datasets
ChIP K-562 ENCSR606KTL.ZNF239.K-562 322 bp overlap
ChIP K562 ENCFF703IKI 331 bp overlap
ChIP K562 ENCFF703IKI 331 bp overlap
ZNF263 4 datasets
ChIP HEK293 ENCFF336CWQ 360 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 102 bp overlap
ChIP HepG2 ENCFF626SSV 240 bp overlap
ChIP K562 ENCFF640RNA 521 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 361 bp overlap
ZNF584 3 datasets
ChIP K562 ENCFF771INO 622 bp overlap
ChIP K562 ENCFF771INO 663 bp overlap
ChIP K562 ENCFF771INO 448 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR845BCL.ZNF639.K-562 194 bp overlap
ChIP K562 ENCFF271FQR 719 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 293 bp overlap
ZNF76 2 datasets
ChIP K-562 ENCSR257AFV.ZNF76.K-562 261 bp overlap
ChIP K562 ENCFF267KQX 361 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 605 bp overlap