Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

AR 2 datasets

ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 111 bp overlap

ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 59 bp overlap

ARNTL 1 dataset

ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 295 bp overlap

ASCL1 1 dataset

ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 115 bp overlap

BRD4 2 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 263 bp overlap

ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 176 bp overlap

CREB1 1 dataset

ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 139 bp overlap

CREB5 1 dataset

ChIP LNCaP GSE137775.CREB5.LNCaP 77 bp overlap

CTCF 2 datasets

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 268 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF338KEP 118 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 526 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 101 bp overlap

FLI1 1 dataset

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 104 bp overlap

FOXA1 15 datasets

ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 107 bp overlap

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 55 bp overlap

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 109 bp overlap

ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 98 bp overlap

ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 102 bp overlap

ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 72 bp overlap

ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 51 bp overlap

ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 54 bp overlap

ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 68 bp overlap

ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 68 bp overlap

ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 102 bp overlap

ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 102 bp overlap

ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 105 bp overlap

ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 69 bp overlap

ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 109 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 541 bp overlap

ChIP DE DE-FOXA2-2 541 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 270 bp overlap

GATA3 1 dataset

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 133 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 541 bp overlap

ChIP DE DE-GATA4-2 541 bp overlap

ChIP foregut GSE117136.GATA4.foregut 455 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 541 bp overlap

ChIP DE DE-GATA6-2 541 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 273 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 353 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 541 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 383 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 309 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 485 bp overlap

ChIP foregut GSE117136.GATA6.foregut 341 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 292 bp overlap

HAND2 2 datasets

ChIP Kelly GSE94822.HAND2.Kelly 259 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 208 bp overlap

HIF1A 2 datasets

ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 153 bp overlap

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 238 bp overlap

HOXB13 7 datasets

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

ChIP LNCaP_EtOH_CTL GSE117304.HOXB13.LNCaP_EtOH_CTL 54 bp overlap

ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 57 bp overlap

ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 72 bp overlap

ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 57 bp overlap

ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 100 bp overlap

ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 78 bp overlap

HOXC6 1 dataset

ChIP 22Rv1 GSE129951.HOXC6.22Rv1 101 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 164 bp overlap

KLF5 1 dataset

ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 147 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 277 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 221 bp overlap

ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 132 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 196 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 153 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 210 bp overlap

OSR2 2 datasets

ChIP HEK293 ENCFF875BDB 243 bp overlap

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 200 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap

PKNOX1 1 dataset

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 141 bp overlap

PLAG1 1 dataset

Motif DE_60h DE_60h-PLAG1_MA0163.1 14 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 418 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 463 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 539 bp overlap

SMARCA2 1 dataset

ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 273 bp overlap

SMARCA4 1 dataset

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 398 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 260 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 62 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 160 bp overlap

TFAP4 1 dataset

ChIP LNCaP GSE28857.TFAP4.LNCaP 80 bp overlap

TLE3 2 datasets

ChIP LNCaP GSE94682.TLE3.LNCaP 59 bp overlap

ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 68 bp overlap

WT1 1 dataset

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 182 bp overlap

XBP1 1 dataset

ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 129 bp overlap

ZBTB11 1 dataset

ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 280 bp overlap

ZNF143 2 datasets

ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 400 bp overlap

ChIP MCF-7 GSE76454.ZNF143.MCF-7 185 bp overlap

ZNF16 1 dataset

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 232 bp overlap

ZNF766 1 dataset

Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
ARPC5		195.5 kb	Distal	Multiome
TSEN15		220.4 kb	Distal	Multiome

Genome Browser