chr10 : 30,080,742 – 30,081,590
848 bp 64 TFs 2 linked genes
This 848 bp open chromatin element is linked to JCAD and MTPAP and is bound by 64 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
JCAD 21.5 kb Distal Multiome
MTPAP 293.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:30,075,742 – 30,086,590
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 172 bp overlap
BRD3 1 dataset
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 150 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 164 bp overlap
CTCF 5 datasets
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 155 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 155 bp overlap
ChIP cardiac_right-atrium-auricular-region ENCSR066GBX.CTCF.cardiac_right-atrium-auricular-region 174 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 169 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 55 bp overlap
EOMES 2 datasets
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 363 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 221 bp overlap
FOXA1 3 datasets
ChIP liver ERP002306.FOXA1.liver 159 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 398 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 299 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 753 bp overlap
ChIP DE DE-FOXA2-2 724 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 217 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 756 bp overlap
ChIP DE DE-GATA4-2 848 bp overlap
ChIP foregut GSE117136.GATA4.foregut 517 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 663 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 501 bp overlap
GATA6 8 datasets
ChIP AGS GSE51705.GATA6.AGS 284 bp overlap
ChIP DE DE-GATA6-1 644 bp overlap
ChIP DE DE-GATA6-2 821 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 739 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 548 bp overlap
ChIP foregut GSE117136.GATA6.foregut 531 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 447 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 483 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HAND2 4 datasets
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 163 bp overlap
ChIP liver ERP002306.HNF4A.liver 150 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 215 bp overlap
Hoxd13 1 dataset
Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 165 bp overlap
NEUROD1 2 datasets
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Nr2e3 2 datasets
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 207 bp overlap
PAX6 2 datasets
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 194 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 352 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Ptf1A 2 datasets
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 262 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 526 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 421 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 384 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 416 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 565 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 155 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 233 bp overlap
TBR1 1 dataset
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TWIST1 2 datasets
Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap
Motif DE_72h DE_72h-TWIST1_MA1123.3 8 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZNF354A 2 datasets
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 137 bp overlap
ZNF8 1 dataset
Motif DE_60h DE_60h-ZNF8_MA1718.1 20 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap