chr10 : 45,962,798 – 45,963,006
208 bp 5 TFs 3 linked genes
This 208 bp open chromatin element is linked to PARGP1, ENSG00000290921, and TIMM23 and is bound by FOXA2, GATA4, GATA6, JUN, and SMAD2_3.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PARGP1 9.1 kb Proximal Proximity
ENSG00000290921 9.4 kb Proximal Proximity
TIMM23 9.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:45,957,798 – 45,968,006
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 208 bp overlap
ChIP DE DE-FOXA2-2 208 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 208 bp overlap
ChIP DE DE-GATA4-2 208 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 208 bp overlap
ChIP DE DE-GATA6-2 208 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 208 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 208 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 208 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 208 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 97 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 163 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 131 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 208 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 167 bp overlap