chr10 : 84,567,154 – 84,568,509
1,355 bp 88 TFs 2 linked genes
This 1.4 kb open chromatin element is linked to RPS3AP5 and CCSER2 and is bound by 88 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPS3AP5 6.7 kb Proximal Proximity
CCSER2 239.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:84,562,154 – 84,573,509
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 394 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 173 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 371 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 255 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCFF867SAS 417 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 241 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 281 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 215 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 315 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 321 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 326 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 295 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 277 bp overlap
E2F7 1 dataset
Motif DE_72h DE_72h-E2F7_MA0758.1 14 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
ChIP hESC GSE26097.EOMES.hESC 545 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 604 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 152 bp overlap
EZH2 5 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 446 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 335 bp overlap
ChIP neural progenitor cell ENCFF018MKA 335 bp overlap
ChIP neural progenitor cell ENCFF018MKA 769 bp overlap
ChIP neural progenitor cell ENCFF018MKA 845 bp overlap
Elf5 4 datasets
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 252 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 685 bp overlap
ChIP DE DE-FOXA2-2 708 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GATA1 2 datasets
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 10 datasets
ChIP DE DE-GATA4-1 1122 bp overlap
ChIP DE DE-GATA4-2 1333 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 542 bp overlap
ChIP foregut GSE117136.GATA4.foregut 442 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 470 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 331 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 19 datasets
ChIP DE DE-GATA6-1 211 bp overlap
ChIP DE DE-GATA6-1 788 bp overlap
ChIP DE DE-GATA6-2 1181 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1087 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1011 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 926 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1355 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1034 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1164 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 759 bp overlap
ChIP foregut GSE117136.GATA6.foregut 467 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 530 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 425 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 270 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 407 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 264 bp overlap
HNF4A 3 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 270 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 352 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 677 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 904 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 631 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 673 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 224 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 246 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 192 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 301 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 268 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 299 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 920 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 755 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 184 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 1127 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 881 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 935 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ChIP hESC GSE18292.NANOG.hESC 434 bp overlap
ChIP hESC GSE20650.NANOG.hESC 271 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 275 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 356 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 236 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 219 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 233 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 55 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 174 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 332 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 167 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 282 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 10 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 246 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 663 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 380 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 430 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 217 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 518 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 825 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 203 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 308 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 188 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 236 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 203 bp overlap
REL 4 datasets
Motif DE_36h DE_36h-REL_MA0101.1 10 bp overlap
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
Motif DE_72h DE_72h-REL_MA0101.1 10 bp overlap
RELA 4 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 293 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 292 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1103 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 697 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 782 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 619 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 565 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 349 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 992 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1128 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 380 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 653 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 475 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 792 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 435 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 552 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 534 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 294 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 798 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 205 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 441 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 815 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 210 bp overlap
ChIP hESC GSE18292.SOX2.hESC 250 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 348 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 359 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 411 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 219 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 551 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCFF513JQN 505 bp overlap
TEAD1 4 datasets
Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap
Motif DE_48h DE_48h-TEAD1_MA0090.4 9 bp overlap
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD4 4 datasets
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 197 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 320 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 148 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 453 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 128 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 232 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 143 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 230 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 384 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 391 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 315 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 416 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 320 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 194 bp overlap
ZNF530 2 datasets
ChIP HEK293 ENCFF931DWM 217 bp overlap
ChIP HEK293 ENCSR701RXW.ZNF530.HEK293 87 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 182 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 296 bp overlap
ZNF680 2 datasets
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap
ZNF768 4 datasets
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
ZNF816 3 datasets
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap
ZNF843 3 datasets
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 272 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 297 bp overlap