chr10 : 93,252,728 – 93,253,353
625 bp 21 TFs 3 linked genes
This 625 bp open chromatin element is linked to CYP26A1, MYOF, and CEP55 and is bound by 21 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CYP26A1 176.7 kb Distal Multiome
MYOF 229.3 kb Distal Multiome
CEP55 243.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:93,247,728 – 93,258,353
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
FOXA1 2 datasets
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 200 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 389 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 625 bp overlap
ChIP DE DE-FOXA2-2 625 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 339 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 625 bp overlap
ChIP DE DE-GATA4-2 625 bp overlap
ChIP foregut GSE117136.GATA4.foregut 479 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 465 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 605 bp overlap
ChIP DE DE-GATA6-2 625 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 622 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 616 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 530 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 505 bp overlap
ChIP foregut GSE117136.GATA6.foregut 482 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 356 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 254 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 551 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 289 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 260 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 520 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 347 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 343 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 329 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 316 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 291 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 577 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 486 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 367 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 333 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 337 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 428 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 224 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 227 bp overlap