chr10 : 95,312,976 – 95,313,538
562 bp 108 TFs 2 linked genes
This 562 bp open chromatin element is linked to PDLIM1 and SORBS1 and is bound by 108 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PDLIM1 22.2 kb Distal Multiome
SORBS1 248.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:95,307,976 – 95,318,538
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 111 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 179 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 66 bp overlap
BRD4 1 dataset
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 165 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 95 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 85 bp overlap
Crx 1 dataset
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
EBF1 3 datasets
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 272 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 365 bp overlap
EBF3 1 dataset
Motif DE_48h DE_48h-EBF3_MA1637.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 420 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE48930.ESR1.MCF-7 191 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_36h DE_36h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_48h DE_48h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 104 bp overlap
Ebf2 1 dataset
Motif DE_48h DE_48h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 562 bp overlap
ChIP DE DE-FOXA2-2 522 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 219 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 499 bp overlap
ChIP DE DE-GATA4-2 562 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 508 bp overlap
ChIP DE DE-GATA6-2 562 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 410 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 452 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 535 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 562 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 543 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 550 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 416 bp overlap
GRHL2 2 datasets
Motif DE_36h DE_36h-GRHL2_MA1105.3 8 bp overlap
Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap
GSC 1 dataset
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
HLF 1 dataset
Motif DE_48h DE_48h-HLF_MA0043.4 9 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 198 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 325 bp overlap
IKZF1 4 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 374 bp overlap
ChIP K562 ENCFF348IBL 312 bp overlap
ChIP K562 ENCFF771OHZ 148 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 250 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 240 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 417 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 296 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 400 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 467 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 262 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 447 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 137 bp overlap
MAZ 1 dataset
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
Motif DE_48h DE_48h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_48h DE_48h-MEIS3_MA0775.2 7 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 318 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 297 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 257 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 124 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 303 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 358 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 315 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
NR4A1 1 dataset
Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap
Nfe2l2 1 dataset
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Nr2f6 1 dataset
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
OTX1 1 dataset
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 196 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 195 bp overlap
PITX1 1 dataset
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
POLR2A 3 datasets
ChIP esophagus muscularis mucosa ENCFF791ZXN 442 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 75 bp overlap
ChIP sigmoid colon ENCFF754JQR 65 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 73 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 149 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 66 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 94 bp overlap
PPARD 1 dataset
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
PRDM1 3 datasets
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 248 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 379 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 345 bp overlap
RBPJ 3 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
RXRB 1 dataset
Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Runx1 3 datasets
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
Rxra 1 dataset
Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap
SMAD2 4 datasets
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 407 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 561 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 562 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 562 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 562 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 513 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 531 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 465 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 562 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 193 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 238 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 553 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 342 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 172 bp overlap
SOX12 2 datasets
Motif DE_36h DE_36h-SOX12_MA1561.2 10 bp overlap
Motif DE_48h DE_48h-SOX12_MA1561.2 10 bp overlap
SOX14 2 datasets
Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap
Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap
SOX15 2 datasets
Motif DE_36h DE_36h-SOX15_MA1152.2 7 bp overlap
Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 349 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 496 bp overlap
SOX18 2 datasets
Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 210 bp overlap
SOX8 2 datasets
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 179 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 136 bp overlap
SPI1 2 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 127 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap
SPIB 2 datasets
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Sox17 2 datasets
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
Stat6 2 datasets
Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 299 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 172 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 206 bp overlap
Wt1 3 datasets
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 147 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 75 bp overlap
ZNF148 4 datasets
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
ChIP K-562 ENCSR018MSO.ZNF148.K-562 261 bp overlap
ZNF16 2 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 326 bp overlap
ZNF281 4 datasets
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 155 bp overlap
ZNF528 1 dataset
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 192 bp overlap
ZNF701 2 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZSCAN31 1 dataset
Motif DE_48h DE_48h-ZSCAN31_MA1722.2 18 bp overlap
Zic2 1 dataset
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap