chr10 : 95,332,677 – 95,333,436
759 bp 42 TFs 2 linked genes
This 759 bp open chromatin element is linked to PDLIM1 and SORBS1 and is bound by 42 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PDLIM1 42.0 kb Distal Multiome
SORBS1 228.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:95,327,677 – 95,338,436
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
CTCFL 1 dataset
Motif DE_48h DE_48h-CTCFL_MA1102.3 8 bp overlap
Crx 1 dataset
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 458 bp overlap
ChIP neural cell ENCFF442QNK 160 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 258 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 225 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 706 bp overlap
FOXH1 1 dataset
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 725 bp overlap
ChIP DE DE-GATA4-2 604 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 297 bp overlap
ChIP DE DE-GATA6-2 583 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 586 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 384 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 612 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 659 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 308 bp overlap
GSC 1 dataset
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
KLF1 2 datasets
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 120 bp overlap
KLF10 1 dataset
Motif DE_48h DE_48h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_48h DE_48h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 294 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 216 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NR5A1 1 dataset
Motif DE_48h DE_48h-NR5A1_MA1540.3 12 bp overlap
OTX1 1 dataset
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
PATZ1 1 dataset
Motif DE_48h DE_48h-PATZ1_MA1961.2 11 bp overlap
PITX1 1 dataset
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 367 bp overlap
PRDM9 1 dataset
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
RBPJ 1 dataset
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 759 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 759 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 722 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 636 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 759 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 747 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 759 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 759 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 567 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Wt1 1 dataset
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
ZNF281 1 dataset
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ZNF530 1 dataset
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
ZNF770 1 dataset
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap