chr10 : 97,089,264 – 97,089,736
472 bp 49 TFs 2 linked genes
This 472 bp open chromatin element is linked to ARHGAP19 and LCOR and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARHGAP19 203.1 kb Distal Multiome
LCOR 257.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:97,084,264 – 97,094,736
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 188 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 156 bp overlap
BRD4 3 datasets
ChIP SW480 GSE110473.BRD4.SW480 191 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 288 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 229 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 282 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 366 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 372 bp overlap
ChIP neural cell ENCFF442QNK 461 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 136 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 172 bp overlap
ESR1 5 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 353 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 376 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 364 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 266 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 285 bp overlap
EZH2 8 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 472 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 163 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 472 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 394 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 362 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 207 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 369 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 52 bp overlap
FOS 3 datasets
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 187 bp overlap
ChIP MCF-7 ENCFF282FWZ 384 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 254 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 331 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 316 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 472 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 440 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 442 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 472 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 447 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 432 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 472 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 472 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 472 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 250 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 222 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 206 bp overlap
MYC 1 dataset
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 118 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 207 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 386 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 317 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 113 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 193 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 457 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 323 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 119 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 118 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 243 bp overlap
REST 4 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 147 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 288 bp overlap
ChIP neural ENCSR000BTV.REST.neural 418 bp overlap
ChIP neural cell ENCFF882LXX 426 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 176 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 117 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 153 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 472 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 472 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 430 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 472 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 472 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 431 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 259 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 154 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 195 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 187 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 203 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 192 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 362 bp overlap
ChIP fibroblast_L169A GSE139053.SS18-SSX.fibroblast_L169A 265 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 435 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 117 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 229 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 226 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 240 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 162 bp overlap
TP63 4 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 266 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 52 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 204 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 305 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 219 bp overlap