chr10 : 97,495,201 – 97,495,487

286 bp 53 TFs 2 linked genes

This 286 bp open chromatin element is linked to MMS19 and UBTD1 and is bound by 53 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
MMS19		2.9 kb	Proximal	Proximity
UBTD1		3.4 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

53 transcription factors

ARID2 1 dataset

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 169 bp overlap

ASCL1 1 dataset

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 164 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 286 bp overlap

BCL11B 1 dataset

ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 106 bp overlap

BCL6 3 datasets

ChIP CD4 GSE59933.BCL6.CD4 218 bp overlap

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 201 bp overlap

ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 210 bp overlap

CEBPA 1 dataset

ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 165 bp overlap

CEBPB 4 datasets

ChIP H1 ENCFF871PTR 208 bp overlap

ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 160 bp overlap

ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 112 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 170 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 265 bp overlap

EHF 1 dataset

ChIP RWPE-1 GSE114241.EHF.RWPE-1 105 bp overlap

ERG 1 dataset

ChIP Jurkat GSE49091.ERG.Jurkat 124 bp overlap

ESR1 2 datasets

ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 130 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 240 bp overlap

FOXA2 1 dataset

ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 124 bp overlap

GABPA 1 dataset

ChIP WA01 ENCSR000BIW.GABPA.WA01 186 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 95 bp overlap

GATA6 1 dataset

ChIP DE DE-GATA6-2 257 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 261 bp overlap

HMBOX1 1 dataset

ChIP K-562 ENCSR757IIU.HMBOX1.K-562 56 bp overlap

KAT7 1 dataset

ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 166 bp overlap

KMT2A 1 dataset

ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 143 bp overlap

MAZ 1 dataset

ChIP HEK293 ENCFF994GSG 206 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 54 bp overlap

MYB 1 dataset

ChIP Jurkat GSE59657.MYB.Jurkat 205 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 208 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 187 bp overlap

NCOR1 1 dataset

ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 141 bp overlap

NFKB1 1 dataset

ChIP L1236 GSE63736.NFKB1.L1236 145 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 244 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 237 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 143 bp overlap

OSR2 1 dataset

ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 253 bp overlap

PRDM1 2 datasets

ChIP HEK293 ENCFF302TBP 191 bp overlap

ChIP HEK293 GSE76494.PRDM1.HEK293 69 bp overlap

SAP30 2 datasets

ChIP H1 ENCFF149IOE 286 bp overlap

ChIP WA01 ENCSR000ATR.SAP30.WA01 285 bp overlap

SIN3A 6 datasets

ChIP H1 ENCFF042ZSL 286 bp overlap

ChIP H1 ENCFF896IJG 286 bp overlap

ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 88 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 268 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 286 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 141 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 221 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 218 bp overlap

SMARCA4 6 datasets

ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 200 bp overlap

ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 113 bp overlap

ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 240 bp overlap

ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 152 bp overlap

ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 253 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 136 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 251 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 250 bp overlap

SP1 2 datasets

ChIP WA01 ENCSR000BIR.SP1.WA01 257 bp overlap

ChIP WTC11 ENCFF688PEU 286 bp overlap

SPI1 2 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 174 bp overlap

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 220 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 137 bp overlap

TBX21 1 dataset

ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 119 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 249 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 211 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 276 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 286 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 286 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 259 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 236 bp overlap

ZBTB21 1 dataset

ChIP HEK293 ENCFF509WYZ 60 bp overlap

ZBTB33 1 dataset

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 153 bp overlap

ZBTB48 1 dataset

ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 67 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 119 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 286 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 177 bp overlap

ZNF652 2 datasets

ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 286 bp overlap

ChIP HepG2 ENCFF331VPZ 249 bp overlap