chr10 : 99,370,159 – 99,370,697
538 bp 14 TFs 6 linked genes
This 538 bp open chromatin element is linked to 6 target genes and is bound by 14 transcription factors.
Linked Genes
6 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CNNM1 41.0 kb Distal Multiome
GOT1 60.2 kb Distal Multiome
SLC25A28 250.0 kb Distal Multiome
ENTPD7 289.1 kb Distal Multiome
HPS1 923.5 kb Distal Multiome+HiCAR
PYROXD2 955.2 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:99,365,159 – 99,375,697
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 110 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 164 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 326 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 195 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 459 bp overlap
ChIP DE DE-FOXA2-2 367 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 538 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 538 bp overlap
ChIP DE DE-GATA6-2 538 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 333 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 343 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 214 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 374 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 402 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 413 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 274 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 157 bp overlap