chr10 : 101,782,084 – 101,782,693
609 bp 87 TFs 2 linked genes
This 609 bp open chromatin element is linked to NPM3 and FGF8 and is bound by 87 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NPM3 752 bp At TSS Proximity
FGF8 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:101,777,084 – 101,787,693
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 369 bp overlap
AR 2 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 108 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 139 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 270 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 111 bp overlap
BRCA1 1 dataset
ChIP K562 ENCFF777JCR 126 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 440 bp overlap
ChIP RKO GSE47190.BRD1.RKO 277 bp overlap
BRD4 8 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 52 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 122 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 222 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 99 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 233 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 185 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 109 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 130 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 347 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 180 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 268 bp overlap
CTCF 1 dataset
ChIP CD14 ENCSR000ATN.CTCF.CD14 320 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 122 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 109 bp overlap
ESR1 7 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 342 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 106 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 211 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 171 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 110 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 117 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 105 bp overlap
ETS1 2 datasets
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 206 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 87 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 208 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 77 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 169 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCFF372SXO 150 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 53 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 188 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 65 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 157 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 514 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 73 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 131 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 384 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 55 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 273 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 326 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 429 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 335 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 184 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 289 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 322 bp overlap
MYC 9 datasets
ChIP DLD-1_MYC-activated GSE117240.MYC.DLD-1_MYC-activated 128 bp overlap
ChIP GP5D GSE51234.MYC.GP5D 194 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 201 bp overlap
ChIP MCF-7 GSE154941.MYC.MCF-7 65 bp overlap
ChIP MDA-MB-231 GSE95303.MYC.MDA-MB-231 202 bp overlap
ChIP NB69 GSE138295.MYC.NB69 437 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
ChIP Raji GSE30726.MYC.Raji 150 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 118 bp overlap
MYCN 3 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 107 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 117 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 132 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 82 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 134 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 143 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NIPBL 3 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 341 bp overlap
ChIP GP5D GSE51234.NIPBL.GP5D 61 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 90 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 364 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 163 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 67 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 186 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 112 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 244 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 55 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 465 bp overlap
PRDM10 5 datasets
ChIP HEK293 ENCFF145WQQ 192 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 113 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 71 bp overlap
ChIP K562 ENCFF740YLK 133 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 186 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 200 bp overlap
RBM39 2 datasets
ChIP HepG2 ENCFF084YZE 118 bp overlap
ChIP HepG2 ENCFF801JUH 116 bp overlap
REST 1 dataset
ChIP CD4 GSE49570.REST.CD4 152 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 316 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 517 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 178 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 150 bp overlap
SCRT1 3 datasets
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCFF513YVP 389 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 371 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 528 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 63 bp overlap
ChIP K-562 ENCSR920BLG.SIN3A.K-562 150 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 318 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 343 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 88 bp overlap
SMARCB1 1 dataset
ChIP HeLa-S3 ENCFF733PLR 50 bp overlap
SMC1 2 datasets
ChIP HCT-116 GSE131606.SMC1.HCT-116 108 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 185 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 464 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 390 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 446 bp overlap
STAG1 1 dataset
ChIP erythroid GSE67783.STAG1.erythroid 55 bp overlap
STAT3 1 dataset
ChIP OCI-Ly7 GSE50723.STAT3.OCI-Ly7 99 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 53 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 177 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 189 bp overlap
TAF1 1 dataset
ChIP HepG2 ENCFF961AVP 121 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 501 bp overlap
TEAD1 1 dataset
ChIP HCT-116 GSE108920.TEAD1.HCT-116 440 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 87 bp overlap
YY1 3 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 145 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 280 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 245 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 468 bp overlap
ZEB1 4 datasets
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 94 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 211 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 74 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 379 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 540 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 235 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 190 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 260 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 329 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 535 bp overlap
ZNF558 1 dataset
ChIP HepG2 ENCFF210VCS 129 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 160 bp overlap
ZNF709 1 dataset
ChIP HepG2 ENCFF151DHM 553 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF772 1 dataset
ChIP HepG2 ENCFF728OGE 364 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 339 bp overlap