chr10 : 117,198,137 – 117,198,892
755 bp 20 TFs 2 linked genes
This 755 bp open chromatin element is linked to PDZD8 and SHTN1 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PDZD8 177.1 kb Distal Multiome
SHTN1 192.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:117,193,137 – 117,203,892
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 285 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 109 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 233 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 208 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 330 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 448 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 155 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 207 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 184 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 181 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 173 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 124 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 168 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 56 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 51 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 332 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 408 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 271 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 269 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 187 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 308 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 738 bp overlap
SPI1 5 datasets
ChIP K-562 GSE70482.SPI1.K-562 168 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 149 bp overlap
ChIP K562 ENCFF410ORC 190 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 111 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 183 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 198 bp overlap