chr11 : 8,015,683 – 8,015,934
251 bp 10 TFs 2 linked genes
This 251 bp open chromatin element is linked to CASC23 and TUB and is bound by 10 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CASC23 585 bp At TSS Proximity
TUB 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:8,010,683 – 8,020,934
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 82 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 82 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 90 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 90 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 116 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF451CNG 64 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 59 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 59 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 251 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 251 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 251 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 251 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 128 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 251 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
TEAD4 2 datasets
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 105 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 135 bp overlap