chr11 : 8,016,443 – 8,016,699
256 bp 63 TFs 2 linked genes
This 256 bp open chromatin element is linked to CASC23 and TUB and is bound by 63 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CASC23 at TSS At TSS Proximity
TUB 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:8,011,443 – 8,021,699
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 135 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 214 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 256 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 77 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 77 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 256 bp overlap
ChIP H1 ENCFF991MKH 76 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 251 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 186 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 160 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 256 bp overlap
ESR1 12 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 145 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 181 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 197 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 204 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 120 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 146 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 130 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 157 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 179 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 148 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 193 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 208 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 190 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 256 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 256 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 113 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 126 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 243 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 114 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 248 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 165 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 184 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 256 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 256 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 256 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 256 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 256 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 256 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 203 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 116 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 256 bp overlap
MYBL2 1 dataset
Motif DE_12h DE_12h-MYBL2_MA0777.1 15 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 239 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 256 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 144 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 256 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 242 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POU5F1 10 datasets
ChIP GM23338 ENCFF333SNB 256 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 256 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 243 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 256 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 192 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 197 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 256 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 256 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 256 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 256 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 169 bp overlap
ChIP H1 ENCFF896IJG 244 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 226 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 256 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 210 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 224 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 157 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 196 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 131 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 254 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 184 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 51 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 152 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 111 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
XBP1 1 dataset
Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 256 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZNF331 3 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ChIP GM23338 ENCFF410NSZ 211 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 142 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 177 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 147 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 126 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap