chr11 : 22,617,807 – 22,618,190
383 bp 5 TFs 2 linked genes
This 383 bp open chromatin element is linked to GAS2 and FANCF and is bound by CTCF, Cebpa, FOXA1, SOX4, and TBP.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GAS2 7.5 kb Proximal Proximity
FANCF 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:22,612,807 – 22,623,190
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
CTCF 3 datasets
ChIP H9 ENCFF152GTF 357 bp overlap
ChIP H9 ENCFF152GTF 158 bp overlap
ChIP endodermal cell ENCFF471YCZ 362 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 195 bp overlap
ChIP BLaER1 ENCFF364PUR 242 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 375 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 117 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 256 bp overlap