chr11 : 66,010,080 – 66,010,400
320 bp 13 TFs 3 linked genes
This 320 bp open chromatin element is linked to CST6, BANF1, and EIF1AD and is bound by 13 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CST6 1.6 kb Proximal Proximity
BANF1 7.8 kb Proximal Proximity
EIF1AD 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:66,005,080 – 66,015,400
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 207 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 320 bp overlap
ChIP DE DE-FOXA2-2 320 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 320 bp overlap
ChIP DE DE-GATA4-2 320 bp overlap
ChIP foregut GSE117136.GATA4.foregut 249 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 320 bp overlap
ChIP DE DE-GATA6-2 320 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 320 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 320 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 320 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 320 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 320 bp overlap
ChIP foregut GSE117136.GATA6.foregut 313 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 320 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 300 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 264 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 309 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 307 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 264 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 137 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 320 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 320 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 320 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 320 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 320 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 158 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 320 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 320 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 242 bp overlap