chr11 : 72,089,150 – 72,089,648
498 bp 15 TFs 3 linked genes
This 498 bp open chromatin element is linked to LRTOMT, LRRC51, and NUMA1 and is bound by 15 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LRTOMT 8.3 kb Proximal Proximity
LRRC51 8.3 kb Proximal Proximity
NUMA1 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:72,084,150 – 72,094,648
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 118 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 55 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 411 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 155 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 478 bp overlap
ChIP DE DE-FOXA2-2 498 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 57 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_15 GSE104399.GATA3.breast_tumor_Male_15 254 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 493 bp overlap
ChIP DE DE-GATA4-2 498 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 498 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 69 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 442 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 255 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 236 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 194 bp overlap
POLR2A 2 datasets
ChIP GM18505 ENCFF311CYB 162 bp overlap
ChIP SK-N-SH ENCFF683PFH 102 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 361 bp overlap
ChIP HepG2 ENCFF554DMZ 498 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 488 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 50 bp overlap