Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

ASCL1 1 dataset

ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 423 bp overlap

CEBPA 1 dataset

ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 168 bp overlap

CLOCK 1 dataset

ChIP BA40_0 GSE96659.CLOCK.BA40_0 151 bp overlap

CTCF 1 dataset

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 149 bp overlap

Cebpa 3 datasets

ChIP BLaER1 ENCFF093OYK 326 bp overlap

ChIP BLaER1 ENCFF335XTP 251 bp overlap

ChIP BLaER1 ENCFF460KDD 275 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 264 bp overlap

EP300 1 dataset

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 284 bp overlap

ESR1 4 datasets

ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 169 bp overlap

ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 224 bp overlap

ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 251 bp overlap

ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 210 bp overlap

ESR1_Y537N 2 datasets

ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 270 bp overlap

ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 232 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 208 bp overlap

ESRRA 9 datasets

ChIP BT-474 GSE81651.ESRRA.BT-474 473 bp overlap

ChIP BT-474 GSE75876.ESRRA.BT-474 260 bp overlap

ChIP BT-474_AICAR GSE75876.ESRRA.BT-474_AICAR 457 bp overlap

ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 473 bp overlap

ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 473 bp overlap

ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 304 bp overlap

ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 473 bp overlap

ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 473 bp overlap

ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 473 bp overlap

ESRRG 1 dataset

ChIP BT-474 GSE144224.ESRRG.BT-474 275 bp overlap

ETS1 2 datasets

ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 89 bp overlap

ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 272 bp overlap

EZH2 2 datasets

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 253 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 277 bp overlap

FEZF1 1 dataset

ChIP HEK293 GSE76494.FEZF1.HEK293 54 bp overlap

FOXA1 8 datasets

ChIP 22Rv1 GSE96652.FOXA1.22Rv1 238 bp overlap

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 207 bp overlap

ChIP A1A3_Brg1KD_Dex GSE112491.FOXA1.A1A3_Brg1KD_Dex 119 bp overlap

ChIP MCF-7 ERP000380.FOXA1.MCF-7 132 bp overlap

ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 126 bp overlap

ChIP T47D-A1-2_Dex GSE112491.FOXA1.T47D-A1-2_Dex 88 bp overlap

ChIP T47D-A1-2_EtOH GSE112491.FOXA1.T47D-A1-2_EtOH 161 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 193 bp overlap

FOXA2 3 datasets

ChIP Caco-2 GSE66218.FOXA2.Caco-2 182 bp overlap

ChIP DE DE-FOXA2-1 357 bp overlap

ChIP DE DE-FOXA2-2 369 bp overlap

GATA3 4 datasets

ChIP MCF-7 ENCFF352QVM 127 bp overlap

ChIP MCF-7 GSE122847.GATA3.MCF-7 118 bp overlap

ChIP MCF-7 GSE133072.GATA3.MCF-7 51 bp overlap

ChIP MCF-7 GSE51274.GATA3.MCF-7 69 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 331 bp overlap

ChIP DE DE-GATA4-2 386 bp overlap

ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 205 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 332 bp overlap

ChIP DE DE-GATA6-2 329 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 279 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 303 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 324 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap

HNF4A 1 dataset

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 169 bp overlap

HNRNPH1 1 dataset

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 152 bp overlap

HOXA9 1 dataset

ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 127 bp overlap

HOXB13 1 dataset

ChIP G-401 GSE65381.HOXB13.G-401 380 bp overlap

MAX 3 datasets

ChIP NCI-H128 GSE41105.MAX.NCI-H128 259 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 238 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 183 bp overlap

NANOG 1 dataset

ChIP WA09 GSE105028.NANOG.WA09 192 bp overlap

NKX2-5 2 datasets

ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 340 bp overlap

ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 227 bp overlap

PAX7 1 dataset

ChIP H9_DOX GSE98976.PAX7.H9_DOX 284 bp overlap

POLR2A 1 dataset

ChIP heart left ventricle ENCFF591JWH 75 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 234 bp overlap

RELA 1 dataset

ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 161 bp overlap

RNF2 1 dataset

ChIP fibroblast GSE139053.RNF2.fibroblast 152 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 134 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 438 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 416 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 432 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 352 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 389 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 305 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 342 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 457 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 152 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 275 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 368 bp overlap

TBX3 1 dataset

ChIP Hep-G2 ENCSR238QRG.TBX3.Hep-G2 273 bp overlap

TBX5 5 datasets

ChIP G296S_4 GSE85628.TBX5.G296S_4 287 bp overlap

ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 249 bp overlap

ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 141 bp overlap

ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 178 bp overlap

ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 99 bp overlap

ZNF18 2 datasets

ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 250 bp overlap

ChIP HEK293 GSE76494.ZNF18.HEK293 159 bp overlap

ZNF750 1 dataset

ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 226 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
TNNT2		514 bp	At TSS	Proximity
TMEM9		220.1 kb	Distal	Multiome

Genome Browser