chr11 : 121,245,998 – 121,246,994
996 bp 99 TFs 3 linked genes
This 996 bp open chromatin element is linked to SC5D, SORL1, and TBCEL and is bound by 99 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SC5D 46.5 kb Distal Multiome
SORL1 206.0 kb Distal Multiome
TBCEL 222.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:121,240,998 – 121,251,994
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 241 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 252 bp overlap
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 164 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 192 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 453 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 349 bp overlap
BRD4 2 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 441 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 294 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 313 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 345 bp overlap
CTCF 5 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 272 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 242 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 260 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 302 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 386 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 251 bp overlap
E2F6 5 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 79 bp overlap
ChIP K562 ENCFF136LTS 195 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 173 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
EHMT2 3 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 229 bp overlap
ChIP K562 ENCFF053BWO 385 bp overlap
ChIP Rh41 GSE118666.EHMT2.Rh41 181 bp overlap
ELF1 2 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 208 bp overlap
ChIP K562 ENCFF496AKI 253 bp overlap
ERG 1 dataset
ChIP ME-1 GSE46044.ERG.ME-1 213 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 480 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 227 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 250 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 258 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 667 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 326 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 201 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 507 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 196 bp overlap
GLIS2 1 dataset
Motif ES_0h ES_0h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 996 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 137 bp overlap
KDM5B 2 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 268 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 210 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF11 3 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF13 2 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF15 2 datasets
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
KLF16 3 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF7 2 datasets
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 163 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 290 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR163IUV.MAZ.K-562 122 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 186 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 513 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 407 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 245 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 454 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 400 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 346 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 421 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PHF20 1 dataset
ChIP K562 ENCFF436SIT 390 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 204 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 285 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 581 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 321 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 419 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 358 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 299 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 295 bp overlap
SALL1 2 datasets
ChIP HepG2 ENCFF426MCK 497 bp overlap
ChIP HepG2 ENCFF426MCK 497 bp overlap
SETDB1 3 datasets
ChIP HEK293 ENCFF676PLV 337 bp overlap
ChIP HEK293 ENCFF676PLV 131 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 177 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 192 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 331 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 3 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 521 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 256 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 488 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 106 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 193 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 404 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 66 bp overlap
VEZF1 1 dataset
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 305 bp overlap
YY1 4 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 250 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 115 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 204 bp overlap
ChIP K562 ENCFF660QRE 204 bp overlap
ZBED4 1 dataset
Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap
ZFP64 2 datasets
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 344 bp overlap
ChIP HepG2 ENCFF873EPM 371 bp overlap
ZFX 3 datasets
ChIP HepG2 ENCFF016NZF 691 bp overlap
ChIP HepG2 ENCFF016NZF 574 bp overlap
ChIP K-562 ENCSR920ASP.ZFX.K-562 258 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF48 2 datasets
ChIP HepG2 ENCFF362CDQ 591 bp overlap
ChIP HepG2 ENCFF362CDQ 406 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 58 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 139 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 72 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 676 bp overlap
ChIP HepG2 ENCFF653WIX 771 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 436 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap