chr12 : 6,720,678 – 6,721,033
355 bp 40 TFs 2 linked genes
This 355 bp open chromatin element is linked to ENSG00000288814 and COPS7A and is bound by 40 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288814 2.8 kb Proximal Proximity
COPS7A 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:6,715,678 – 6,726,033
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR241LIH.AFF1.K-562 234 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 349 bp overlap
ChIP K562 ENCFF938UXQ 355 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 355 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 355 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 355 bp overlap
ChIP DE DE-FOXA2-2 355 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 166 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 208 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 355 bp overlap
ChIP DE DE-GATA4-2 355 bp overlap
ChIP foregut GSE117136.GATA4.foregut 228 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 355 bp overlap
ChIP DE DE-GATA6-2 355 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 355 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 355 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 355 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 355 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 355 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 355 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 157 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 124 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 355 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 243 bp overlap
ChIP K562 ENCFF928TKZ 355 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 355 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 225 bp overlap
ChIP K562 ENCFF744ALD 215 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 289 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 289 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 320 bp overlap
ChIP K562 ENCFF348IBL 355 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 285 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 261 bp overlap
ChIP K562 ENCFF128TYE 148 bp overlap
ChIP K562 ENCFF133OLU 118 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 295 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 240 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 212 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 267 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 208 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 120 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 173 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 176 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 127 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 253 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 231 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 355 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 282 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 213 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 355 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 312 bp overlap
TCF3 1 dataset
ChIP Ramos GSE139810.TCF3.Ramos 202 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 173 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 252 bp overlap
ChIP K562 ENCFF877JCX 348 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 355 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 251 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 348 bp overlap