chr12 : 6,773,635 – 6,773,979
344 bp 91 TFs 2 linked genes
This 344 bp open chromatin element is linked to LAG3 and PTMS and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LAG3 1.1 kb Proximal Proximity
PTMS 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:6,768,635 – 6,778,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 220 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 220 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 185 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 148 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 66 bp overlap
ChIP HepG2 ENCFF773YDL 270 bp overlap
AR 2 datasets
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 86 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 123 bp overlap
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 344 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 68 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 344 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 68 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 262 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 344 bp overlap
BRD4 9 datasets
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 82 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 163 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 97 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 344 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 321 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 131 bp overlap
ChIP hESC GSE33281.BRD4.hESC 79 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 172 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 343 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 193 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 239 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 67 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 138 bp overlap
CTCF 3 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 220 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 197 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 166 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 245 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 203 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 344 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 102 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 344 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 106 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 99 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 195 bp overlap
ERG 4 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 319 bp overlap
ChIP K-562 GSE23730.ERG.K-562 224 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 234 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 234 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 317 bp overlap
ChIP WTC11 ENCFF812SCD 68 bp overlap
EZH2 15 datasets
ChIP B cell ENCFF803EMO 186 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 316 bp overlap
ChIP GM23338 ENCFF613YON 61 bp overlap
ChIP H1 ENCFF232NZA 344 bp overlap
ChIP H1 ENCFF232NZA 247 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 248 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 344 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 344 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 170 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 344 bp overlap
ChIP hESC GSE113817.EZH2.hESC 331 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 188 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 344 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 188 bp overlap
ChIP neural progenitor cell ENCFF472NFV 344 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 228 bp overlap
FOXP1 2 datasets
ChIP WTC11 ENCFF338WGC 293 bp overlap
ChIP WTC11 ENCFF338WGC 301 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 182 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 192 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 166 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 344 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 218 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 144 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 292 bp overlap
HMGB1 1 dataset
ChIP HUVEC-C GSE98245.HMGB1.HUVEC-C 308 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 132 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 83 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 344 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 344 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 180 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 211 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 344 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 189 bp overlap
KDM4A 6 datasets
ChIP H1 ENCFF078LED 344 bp overlap
ChIP H1 ENCFF078LED 274 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 246 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 306 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 301 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 340 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 247 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 121 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 71 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 255 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 220 bp overlap
MAX 2 datasets
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 182 bp overlap
ChIP WTC11 ENCFF223QFY 273 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 161 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 167 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 336 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 170 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 187 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 182 bp overlap
NCAPH2 3 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 324 bp overlap
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 198 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 236 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 229 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 344 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 344 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 73 bp overlap
PAX5 2 datasets
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 124 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 185 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 344 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 145 bp overlap
POLR2A 1 dataset
ChIP GM19193 ENCFF599VTO 252 bp overlap
POU5F1 5 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 112 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 130 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 344 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 344 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 273 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 292 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 344 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 194 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 135 bp overlap
ChIP HepG2 ENCFF939HTZ 172 bp overlap
RNF2 3 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 51 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 267 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 344 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 344 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 344 bp overlap
RUNX1 2 datasets
ChIP ME-1 GSE46044.RUNX1.ME-1 293 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 268 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 344 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 258 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 138 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 149 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 275 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 220 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 308 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 159 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 344 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 196 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 199 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 344 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 344 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 86 bp overlap
SUZ12 7 datasets
ChIP H1 ENCFF881NFR 321 bp overlap
ChIP H1 ENCFF881NFR 344 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 106 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 241 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 316 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 344 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 344 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 63 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 89 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 297 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 285 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 332 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 344 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 251 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 344 bp overlap
YY1 4 datasets
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 158 bp overlap
ChIP H1 ENCFF524BTL 219 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 344 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 161 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 179 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 344 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 220 bp overlap
ZNF649 1 dataset
ChIP HEK293T GSE78099.ZNF649.HEK293T 309 bp overlap