chr1 : 22,443,217 – 22,443,731
514 bp 29 TFs 2 linked genes
This 514 bp open chromatin element is linked to ZBTB40 and EPHB2 and is bound by 29 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZBTB40 8.1 kb Proximal Proximity
EPHB2 267.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:22,438,217 – 22,448,731
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 302 bp overlap
ChIP K562 ENCFF673OEZ 183 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 476 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 326 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 440 bp overlap
ChIP DE DE-FOXA2-2 270 bp overlap
GATA1 2 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 126 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 175 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 514 bp overlap
ChIP foregut GSE117136.GATA4.foregut 330 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 420 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 458 bp overlap
ChIP DE DE-GATA6-2 514 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 514 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 436 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 514 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap
ChIP foregut GSE117136.GATA6.foregut 273 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 273 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 402 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 514 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 514 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 514 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 514 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 438 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 451 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 468 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 441 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 514 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP H1 ENCFF010YXS 216 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 285 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 260 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 299 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 395 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 266 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 514 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 496 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 424 bp overlap
ChIP hESC GSE18292.NANOG.hESC 195 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 188 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 224 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 342 bp overlap
POU5F1 6 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 390 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 514 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 389 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 206 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 375 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 445 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 442 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 345 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 420 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 412 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 455 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 413 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 139 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 162 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 237 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 391 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 295 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 202 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 175 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 282 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 145 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 239 bp overlap