chr12 : 26,116,509 – 26,116,834
325 bp 18 TFs 3 linked genes
This 325 bp open chromatin element is linked to SSPN, BHLHE41, and ENSG00000256894 and is bound by 18 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SSPN 5.2 kb Proximal Proximity
BHLHE41 8.2 kb Proximal Proximity
ENSG00000256894 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:26,111,509 – 26,121,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
BACH1 1 dataset
ChIP K562 ENCFF419VIM 120 bp overlap
BRD4 1 dataset
ChIP MM1-S GSE45984.BRD4.MM1-S 208 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 174 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 263 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 301 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 325 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 325 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 263 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 325 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 244 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 68 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 102 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 222 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF791ZXN 157 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 248 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 231 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 325 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 325 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 264 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 298 bp overlap
ChIP HEK293 ENCFF308WOW 228 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 325 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 252 bp overlap