chr12 : 31,962,116 – 31,962,481
365 bp 33 TFs 2 linked genes
This 365 bp open chromatin element is linked to RESF1 and LINC02422 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RESF1 2.7 kb Proximal Proximity
LINC02422 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:31,957,116 – 31,967,481
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 260 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 222 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF521IZR 207 bp overlap
BRD4 5 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 365 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 135 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 229 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 64 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 86 bp overlap
ESR1 34 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 158 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 146 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 333 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 365 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 233 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 365 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 201 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 258 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 139 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 147 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 365 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 365 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 246 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 107 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 194 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 187 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 308 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 297 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 248 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 247 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 270 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 249 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 226 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 236 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 220 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 119 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 195 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 148 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 132 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 101 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 88 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 200 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 207 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 151 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 89 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 91 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 178 bp overlap
FOXA1 1 dataset
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 151 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 241 bp overlap
ChIP DE DE-FOXA2-1 365 bp overlap
ChIP DE DE-FOXA2-2 365 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 131 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 295 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 365 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 361 bp overlap
ChIP foregut GSE117136.GATA4.foregut 365 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 304 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 260 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 286 bp overlap
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 261 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 356 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 295 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 251 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 326 bp overlap
ChIP foregut GSE117136.GATA6.foregut 365 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 264 bp overlap
HNF1A 2 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 227 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 169 bp overlap
HNF1B 2 datasets
ChIP PDAC GSE64557.HNF1B.PDAC 365 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 325 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 103 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 233 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 102 bp overlap
MED1 1 dataset
ChIP MOLM-14 GSE65138.MED1.MOLM-14 161 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 242 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 182 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 365 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 205 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 365 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 207 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 245 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 163 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 365 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 285 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 273 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 365 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 217 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 320 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 123 bp overlap
ZNF384 2 datasets
ChIP K-562 ENCSR000EFP.ZNF384.K-562 247 bp overlap
ChIP K562 ENCFF365NXQ 297 bp overlap