chr12 : 59,317,267 – 59,318,030
763 bp 138 TFs 2 linked genes
This 763 bp open chromatin element is linked to ENSG00000286279 and SLC16A7 and is bound by 138 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286279 4.7 kb Proximal Proximity
SLC16A7 278.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:59,312,267 – 59,323,030
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
138 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 288 bp overlap
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ARNT 1 dataset
ChIP A-549 GSE85352.ARNT.A-549 282 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 276 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 378 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 398 bp overlap
Ahr::Arnt 1 dataset
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BRD2 1 dataset
ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 195 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 109 bp overlap
Bcl11B 2 datasets
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 154 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 404 bp overlap
CTCF 3 datasets
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 120 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 126 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 264 bp overlap
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF335XTP 433 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 285 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 269 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 481 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 284 bp overlap
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 123 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 425 bp overlap
ETV2::FOXI1 1 dataset
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 1 dataset
Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap
Ebf4 2 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOSL2 2 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2_MA0478.2 10 bp overlap
FOXO1::ELF1 1 dataset
Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 139 bp overlap
Foxl2 1 dataset
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
GATA5 2 datasets
Motif DE_12h DE_12h-GATA5_MA0766.3 8 bp overlap
Motif ES_0h ES_0h-GATA5_MA0766.3 8 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
IRF7 1 dataset
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
ISL2 1 dataset
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 234 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 233 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 102 bp overlap
KLF1 1 dataset
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF17 1 dataset
Motif ES_0h ES_0h-KLF17_MA1514.2 14 bp overlap
KLF2 1 dataset
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap
KLF7 2 datasets
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 4 datasets
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
ChIP WTC11 ENCFF744MZI 271 bp overlap
ChIP WTC11 ENCFF744MZI 205 bp overlap
NFYA 2 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYC 2 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
Nkx3-1 1 dataset
Motif ES_0h ES_0h-Nkx3-1_MA0124.3 7 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
PGR 1 dataset
Motif ES_0h ES_0h-PGR_MA2327.1 9 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PLAG1 1 dataset
Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 374 bp overlap
ChIP H1 ENCFF566JSR 380 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 422 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 287 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 435 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RELB 1 dataset
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
REST 1 dataset
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 255 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 168 bp overlap
Runx1 2 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SOX18 1 dataset
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SP1 2 datasets
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 161 bp overlap
SP3 1 dataset
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 2 datasets
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
STAT1::STAT2 1 dataset
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 3 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
TGIF2 2 datasets
ChIP WTC11 ENCFF649SHI 441 bp overlap
ChIP WTC11 ENCFF649SHI 329 bp overlap
TP53 2 datasets
ChIP H9 GSE142050.TP53.H9 284 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 112 bp overlap
TP73 1 dataset
Motif ES_0h ES_0h-TP73_MA0861.2 16 bp overlap
Tfcp2l1 1 dataset
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 257 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 411 bp overlap
Yy1 2 datasets
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB12 1 dataset
Motif ES_0h ES_0h-ZBTB12_MA1649.2 7 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 485 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF135 2 datasets
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 326 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF143 2 datasets
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 140 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 271 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 430 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF382 1 dataset
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF449 1 dataset
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF460 2 datasets
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF530 2 datasets
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF675 2 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF692 2 datasets
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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