chr12 : 64,229,328 – 64,229,649
321 bp 44 TFs 2 linked genes
This 321 bp open chromatin element is linked to ENSG00000293269 and KICS2 and is bound by 44 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000293269 7.0 kb Proximal Proximity
KICS2 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:64,224,328 – 64,234,649
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 252 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 239 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 138 bp overlap
CDK6 2 datasets
ChIP KB GSE52469.CDK6.KB 110 bp overlap
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
CTCF 4 datasets
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 279 bp overlap
ChIP MCF-7 ENCFF139NQI 216 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 136 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 169 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 291 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 152 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 207 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 139 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 221 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 153 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 172 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 321 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 268 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 309 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 142 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 321 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 181 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 227 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 260 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 228 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 321 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 129 bp overlap
NKX2-2 1 dataset
Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif DE_36h DE_36h-NKX2-5_MA0063.3 7 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 321 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 206 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 146 bp overlap
Plagl1 1 dataset
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 321 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 311 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 288 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 281 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 320 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 236 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 156 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 263 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 255 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 180 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 267 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 316 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 201 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 287 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 223 bp overlap
Tfcp2l1 1 dataset
Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 280 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 317 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 279 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 257 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 279 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 161 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap