chr12 : 70,251,242 – 70,251,469
227 bp 111 TFs 2 linked genes
This 227 bp open chromatin element is linked to CNOT2 and PRANCR and is bound by 111 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CNOT2 7.8 kb Proximal Proximity
PRANCR 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:70,246,242 – 70,256,469
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 227 bp overlap
AR 2 datasets
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 137 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 99 bp overlap
ARID3A 2 datasets
ChIP K-562 ENCSR000EFY.ARID3A.K-562 227 bp overlap
ChIP K562 ENCFF728CDS 226 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 135 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 193 bp overlap
ATF2 6 datasets
ChIP HEK293 ENCFF194VKZ 87 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 227 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 133 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 227 bp overlap
ChIP K562 ENCFF139ZZG 227 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 162 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 220 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 173 bp overlap
CHAMP1 3 datasets
ChIP K-562 ENCSR065XVO.CHAMP1.K-562 227 bp overlap
ChIP K-562 ENCSR315NNL.CHAMP1.K-562 227 bp overlap
ChIP K562 ENCFF860ZIW 227 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 175 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 59 bp overlap
CTCF 1 dataset
ChIP gastrocnemius medialis ENCFF468QWC 227 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 208 bp overlap
ChIP K562 ENCFF775HUO 222 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 227 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 224 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 191 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 70 bp overlap
EP400 1 dataset
ChIP K-562 ENCSR817QKV.EP400.K-562 227 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
EZH1 2 datasets
ChIP ProEs GSE59087.EZH1.ProEs 92 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 52 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 180 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 94 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 227 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 227 bp overlap
ChIP erythroblast ENCFF867JAR 227 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 100 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 60 bp overlap
GATA4 4 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 160 bp overlap
ChIP foregut GSE117136.GATA4.foregut 109 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 123 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 172 bp overlap
ChIP DE DE-GATA6-2 197 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 227 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 227 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 227 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 227 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 227 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 196 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 98 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 181 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 227 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 227 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 199 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 227 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 227 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 227 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 227 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 179 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 227 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 227 bp overlap
ChIP K562 ENCFF055GAZ 227 bp overlap
ChIP K562 ENCFF317JJX 227 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 202 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 227 bp overlap
ChIP K562 ENCFF348IBL 227 bp overlap
ChIP K562 ENCFF771OHZ 227 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 62 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 204 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 118 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 225 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 227 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 227 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 227 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 227 bp overlap
KDM1A 2 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 227 bp overlap
ChIP K562 ENCFF128TYE 227 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR343ELW.LEF1.K-562 227 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 185 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 227 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 77 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 227 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 227 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 227 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 173 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 227 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 227 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 92 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 227 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 168 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 140 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 227 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 227 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 170 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 215 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 216 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 220 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 227 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 227 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 227 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 227 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 227 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF196WTG 212 bp overlap
RUNX1 1 dataset
ChIP THP-1 GSE79899.RUNX1.THP-1 166 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 227 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 186 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 125 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 195 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 183 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 221 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 227 bp overlap
TAL1 1 dataset
ChIP K-562 ENCSR106FRG.TAL1.K-562 200 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 137 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 227 bp overlap
ChIP HEK293 ENCFF582MWI 184 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 227 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 227 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 227 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 131 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 227 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 227 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 166 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 181 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 127 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 227 bp overlap
ZFP91 1 dataset
ChIP K562 ENCFF501CDP 227 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 192 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 227 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 116 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 125 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 192 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 227 bp overlap
ChIP K562 ENCFF352SDL 227 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 163 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 227 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 223 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 227 bp overlap
ZNF24 10 datasets
ChIP HEK293 ENCFF308WOW 223 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 227 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 227 bp overlap
ChIP K562 ENCFF497GLV 227 bp overlap
ChIP K562 ENCFF615YYW 227 bp overlap
ChIP K562 ENCFF781QQQ 227 bp overlap
ChIP K562 ENCFF877JCX 227 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 227 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 227 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 227 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 227 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 178 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 184 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 227 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 59 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 221 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 204 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 175 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 193 bp overlap
ZSCAN30 3 datasets
ChIP HEK293 ENCFF082YBI 227 bp overlap
ChIP HEK293 ENCFF082YBI 99 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 227 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 70 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 217 bp overlap
ZZZ3 1 dataset
ChIP K-562 ENCSR780BBJ.ZZZ3.K-562 148 bp overlap