chr12 : 71,659,062 – 71,659,287
225 bp 10 TFs 2 linked genes
This 225 bp open chromatin element is linked to ZFC3H1 and THAP2 and is bound by 10 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZFC3H1 4.5 kb Proximal Proximity
THAP2 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:71,654,062 – 71,664,287
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 225 bp overlap
ChIP DE DE-FOXA2-2 225 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 169 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 225 bp overlap
ChIP DE DE-GATA4-2 225 bp overlap
ChIP foregut GSE117136.GATA4.foregut 225 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 225 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 148 bp overlap
ChIP DE DE-GATA6-1 225 bp overlap
ChIP DE DE-GATA6-2 225 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 225 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 225 bp overlap
ChIP foregut GSE117136.GATA6.foregut 215 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 225 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 133 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 116 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 225 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 225 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 89 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 225 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 156 bp overlap