chr12 : 93,384,690 – 93,385,099
409 bp 13 TFs 2 linked genes
This 409 bp open chromatin element is linked to NUDT4 and ENSG00000257252 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NUDT4 6.8 kb Proximal Proximity
ENSG00000257252 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:93,379,690 – 93,390,099
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 257 bp overlap
FOXA1 2 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 236 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 129 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 205 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 114 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 409 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 200 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 141 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCFF023CAZ 66 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 124 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 275 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 409 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 378 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 400 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 288 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 101 bp overlap