chr12 : 97,561,639 – 97,561,804
165 bp 14 TFs 2 linked genes
This 165 bp open chromatin element is linked to ENSG00000276398 and ENSG00000278802 and is bound by 14 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000276398 784 bp At TSS Proximity
ENSG00000278802 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:97,556,639 – 97,566,804
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 70 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 112 bp overlap
ESR1 6 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 165 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 92 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 165 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 132 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 99 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 67 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 140 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 165 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 161 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 137 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 151 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 165 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 165 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 59 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 140 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 165 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCFF467DDW 110 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap