Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

AFF1 1 dataset

ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 168 bp overlap

AR 1 dataset

ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 290 bp overlap

BRD4 1 dataset

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 311 bp overlap

CHD4 1 dataset

ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 87 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap

CRY1 1 dataset

ChIP U2OS GSE44236.CRY1.U2OS 211 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 162 bp overlap

ChIP BLaER1 ENCFF364PUR 97 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 214 bp overlap

ESR1 1 dataset

ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 291 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 296 bp overlap

EZH2 6 datasets

ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 326 bp overlap

ChIP ProEs GSE59087.EZH2.ProEs 243 bp overlap

ChIP SF8628 GSE94834.EZH2.SF8628 194 bp overlap

ChIP astrocyte ENCFF365JTP 233 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 115 bp overlap

ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 126 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 429 bp overlap

ChIP DE DE-GATA4-2 405 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 248 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 399 bp overlap

ChIP DE DE-GATA6-2 426 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 458 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 458 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 458 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 458 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 458 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 458 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 138 bp overlap

HDAC1 1 dataset

ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 153 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 272 bp overlap

KDM1A 2 datasets

ChIP K-562 GSE117944.KDM1A.K-562 105 bp overlap

ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 96 bp overlap

MED 1 dataset

ChIP SEM GSE83671.MED.SEM 237 bp overlap

PCBP2 2 datasets

ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 372 bp overlap

ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 372 bp overlap

PCGF2 1 dataset

ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 220 bp overlap

POU2F1 1 dataset

ChIP T-47D GSE148277.POU2F1.T-47D 297 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 418 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 345 bp overlap

RNF2 2 datasets

ChIP K-562 ENCSR138FUZ.RNF2.K-562 119 bp overlap

ChIP K-562 ENCSR820GND.RNF2.K-562 77 bp overlap

RUNX1 1 dataset

ChIP NALM-6 GSE126300.RUNX1.NALM-6 57 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 458 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 356 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 428 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 257 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 371 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 325 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 342 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 198 bp overlap

SMARCA4 2 datasets

ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 84 bp overlap

ChIP K-562 ENCSR643VTW.SMARCA4.K-562 282 bp overlap

SMC1 1 dataset

ChIP DKO GSE131606.SMC1.DKO 301 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 366 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 458 bp overlap

SS18 1 dataset

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 423 bp overlap

SUZ12 2 datasets

ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 123 bp overlap

ChIP K-562 ENCSR000AUC.SUZ12.K-562 112 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap

ZNF585B 2 datasets

ChIP HEK293 ENCFF657XIZ 132 bp overlap

ChIP HEK293 ENCSR011XCI.ZNF585B.HEK293 261 bp overlap

Gene	Dist. to TSS	Distance	Link type
SPRING1	43.3 kb	Distal	Multiome
RNFT2	43.5 kb	Distal	Multiome
LINC00173	161.4 kb	Distal	Multiome
FBXW8	216.2 kb	Distal	Multiome
MED13L	417.1 kb	Distal	Multiome+HiCAR

Genome Browser