chr12 : 118,520,842 – 118,521,879
1,037 bp 16 TFs 2 linked genes
This 1.0 kb open chromatin element is linked to SUDS3 and TAOK3 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SUDS3 144.9 kb Distal Multiome
TAOK3 148.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:118,515,842 – 118,526,879
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 173 bp overlap
BRD4 2 datasets
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 173 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 306 bp overlap
ChIP BLaER1 ENCFF274GAT 282 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
ESRRA 1 dataset
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 118 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 350 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 198 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 239 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 119 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 979 bp overlap
ChIP DE DE-FOXA2-2 927 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 463 bp overlap
ChIP DE DE-GATA4-2 990 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 819 bp overlap
ChIP DE DE-GATA6-2 1037 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 461 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1037 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 481 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 324 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 331 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 241 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1034 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 518 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 340 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 356 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 297 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1034 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1037 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 233 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 755 bp overlap