chr12 : 120,429,329 – 120,429,611
282 bp 21 TFs 2 linked genes
This 282 bp open chromatin element is linked to COX6A1 and ENSG00000111780 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
COX6A1 8.5 kb Proximal Proximity
ENSG00000111780 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:120,424,329 – 120,434,611
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 93 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 105 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 110 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 160 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 170 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
EZH1 1 dataset
ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 82 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 101 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 282 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 259 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 282 bp overlap
ChIP DE DE-GATA6-2 224 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 61 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 100 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 144 bp overlap
ChIP K562 ENCFF348IBL 217 bp overlap
MAX 1 dataset
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 64 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 105 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 110 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 122 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 187 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 119 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 110 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 252 bp overlap
ZNF623 2 datasets
ChIP HEK293 ENCFF505YHP 238 bp overlap
ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 147 bp overlap