chr12 : 131,622,298 – 131,622,529
231 bp 67 TFs 2 linked genes
This 231 bp open chromatin element is linked to ENSG00000256258 and ENSG00000279455 and is bound by 67 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000256258 673 bp At TSS Proximity
ENSG00000279455 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:131,617,298 – 131,627,529
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 54 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 151 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 174 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 95 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 227 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 148 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 198 bp overlap
CDK8 2 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 231 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 231 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 231 bp overlap
CTCF 2 datasets
ChIP dorsolateral prefrontal cortex ENCFF235CPK 52 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 231 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 166 bp overlap
ERG 2 datasets
ChIP ME-1 GSE46044.ERG.ME-1 93 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 208 bp overlap
ESR1 3 datasets
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 231 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 108 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 122 bp overlap
EZH2 3 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 231 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 198 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 231 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 231 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 231 bp overlap
HDAC2 3 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 231 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 228 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 100 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 159 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 83 bp overlap
JMJD1C 1 dataset
ChIP NB4 GSE63484.JMJD1C.NB4 231 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 231 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 231 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 73 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 211 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 106 bp overlap
ChIP H1 ENCFF914VQY 192 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 231 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 88 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 215 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 225 bp overlap
MTF2 1 dataset
ChIP HepG2 ENCFF916FZN 231 bp overlap
MYB 1 dataset
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 196 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 180 bp overlap
MYOD1 7 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 231 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 201 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 231 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 231 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 193 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 204 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 191 bp overlap
MYOG 4 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 218 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 231 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 205 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 170 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 174 bp overlap
OLIG2 6 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 231 bp overlap
ChIP brain-prefrontal-cortex_2016029 GSE129039.OLIG2.brain-prefrontal-cortex_2016029 205 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 231 bp overlap
ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 231 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 223 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 231 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 191 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 187 bp overlap
PML 1 dataset
ChIP NB4 GSE126720.PML.NB4 138 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 148 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 190 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 159 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 118 bp overlap
PTBP1 2 datasets
ChIP K-562 ENCSR948KMB.PTBP1.K-562 125 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 108 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 149 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 231 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 211 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 196 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 223 bp overlap
REST 1 dataset
ChIP LNCaP GSE119385.REST.LNCaP 231 bp overlap
RUNX1 4 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 157 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 224 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 157 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 231 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 231 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 189 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 186 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 177 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 180 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 148 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 231 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 140 bp overlap
SPI1 1 dataset
ChIP ME-1 GSE46044.SPI1.ME-1 136 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 166 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 112 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 185 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 231 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 231 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 231 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 231 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 189 bp overlap
USF1 1 dataset
ChIP K562 ENCFF202SFC 161 bp overlap
USF2 1 dataset
ChIP K562 ENCFF397QGU 69 bp overlap
ZBTB7A 3 datasets
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 231 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 231 bp overlap
ChIP K562 ENCFF579ZGM 231 bp overlap
ZFP36 3 datasets
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 77 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 123 bp overlap
ChIP K562 ENCFF255RZG 149 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 231 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 188 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 123 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 131 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 102 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 188 bp overlap
ZNF398 1 dataset
ChIP H9 GSE133630.ZNF398.H9 78 bp overlap
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