chr13 : 23,881,121 – 23,881,754
633 bp 44 TFs 2 linked genes
This 633 bp open chromatin element is linked to MIPEP and PCOTH and is bound by 44 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MIPEP 7.6 kb Proximal Proximity
PCOTH 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:23,876,121 – 23,886,754
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 193 bp overlap
EHF 2 datasets
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
ELF3 2 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 217 bp overlap
Elf5 2 datasets
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 581 bp overlap
ChIP DE DE-FOXA2-2 530 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 469 bp overlap
ChIP DE DE-GATA4-2 513 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 497 bp overlap
ChIP DE DE-GATA6-2 563 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 414 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 393 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap
KLF17 3 datasets
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap
KLF9 3 datasets
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
MYBL1 1 dataset
Motif DE_60h DE_60h-MYBL1_MA0776.1 12 bp overlap
NFYB 4 datasets
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
Nr2F6 1 dataset
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Nr2e1 1 dataset
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
PBX3 2 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
POU4F2 1 dataset
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
POU5F1 1 dataset
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
RREB1 3 datasets
Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap
Motif DE_48h DE_48h-RREB1_MA0073.2 19 bp overlap
Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap
Rarb 1 dataset
Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 563 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 400 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 463 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 494 bp overlap
SP5 6 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
TBX5 3 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TFAP2A 3 datasets
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 4 datasets
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 4 datasets
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_60h DE_60h-TFAP2E_MA1569.2 9 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZNF75A 2 datasets
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN16 1 dataset
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 4 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 2 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap