chr13 : 24,591,684 – 24,592,420
736 bp 20 TFs 2 linked genes
This 736 bp open chromatin element is linked to PARP4 and ATP12A and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PARP4 79.2 kb Distal Multiome
ATP12A 88.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:24,586,684 – 24,597,420
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 219 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 441 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 107 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 131 bp overlap
ChIP MCF-7 ENCFF465LTH 225 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 736 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 736 bp overlap
ChIP DE DE-GATA4-2 736 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 736 bp overlap
ChIP DE DE-GATA6-2 736 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 736 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 736 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 736 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 638 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 324 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 520 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 736 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 352 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 736 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 420 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 335 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCFF658MHR 316 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 240 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 718 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 236 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 736 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 525 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 444 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 736 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 736 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 736 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 736 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 694 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 138 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 176 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 522 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 237 bp overlap
ZNF513 1 dataset
ChIP HEK293 ENCFF457TCC 405 bp overlap