chr13 : 51,175,033 – 51,175,343
310 bp 21 TFs 2 linked genes
This 310 bp open chromatin element is linked to C13orf42 and ENSG00000289894 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
C13orf42 2.6 kb Proximal Proximity
ENSG00000289894 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,170,033 – 51,180,343
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 310 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 162 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 208 bp overlap
BRD4 2 datasets
ChIP hESC GSE33281.BRD4.hESC 80 bp overlap
ChIP hESC GSE33281.BRD4.hESC 64 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 310 bp overlap
CTCF 1 dataset
ChIP GM23338 ENCFF772DML 148 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 245 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 80 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 190 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 160 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 170 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 310 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 54 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 120 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 271 bp overlap
ChIP GM23338 ENCFF450WCS 86 bp overlap
ChIP H1 ENCFF833NJP 310 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 113 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 131 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 235 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 134 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 155 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 179 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 227 bp overlap