chr13 : 96,992,554 – 96,992,979
425 bp 20 TFs 2 linked genes
This 425 bp open chromatin element is linked to OXGR1 and LINC00359 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
OXGR1 1.4 kb Proximal Proximity
LINC00359 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:96,987,554 – 96,997,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 343 bp overlap
AR 20 datasets
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 89 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 77 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 123 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 191 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 425 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 115 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 58 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 68 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 88 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 202 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 64 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 109 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 57 bp overlap
ChIP prostate GSE65478.AR.prostate 130 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 126 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 89 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 128 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 166 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 303 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 70 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 416 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 349 bp overlap
FOXA1 11 datasets
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 62 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 77 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 136 bp overlap
ChIP primary-prostate-cancer_P1_DSG GSE114737.FOXA1.primary-prostate-cancer_P1_DSG 67 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 334 bp overlap
ChIP primary-prostate-cancer_P3_DSG GSE114737.FOXA1.primary-prostate-cancer_P3_DSG 74 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 147 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 94 bp overlap
ChIP prostate_P19_T GSE130408.FOXA1.prostate_P19_T 72 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 107 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 99 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 425 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 425 bp overlap
ChIP DE DE-GATA4-2 425 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 425 bp overlap
ChIP DE DE-GATA6-2 425 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 268 bp overlap
HOXB13 1 dataset
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 98 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 304 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 180 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 343 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 405 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 403 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 382 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 277 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 300 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 187 bp overlap