chr13 : 110,296,934 – 110,297,384
450 bp 15 TFs 2 linked genes
This 450 bp open chromatin element is linked to COL4A1 and COL4A2 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
COL4A1 9.8 kb Proximal Proximity
COL4A2 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:110,291,934 – 110,302,384
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 65 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 164 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 164 bp overlap
EZH2 2 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 450 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 199 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 317 bp overlap
ChIP DE DE-GATA4-2 300 bp overlap
ChIP foregut GSE117136.GATA4.foregut 311 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 147 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 277 bp overlap
ChIP DE DE-GATA6-2 301 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 320 bp overlap
ChIP foregut GSE117136.GATA6.foregut 322 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 290 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 239 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 110 bp overlap
NANOG 2 datasets
ChIP WA09 GSE105028.NANOG.WA09 198 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 183 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 154 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 353 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 275 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 252 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 261 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 450 bp overlap